PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn085431
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family HB-other
Protein Properties Length: 395aa    MW: 44028.8 Da    PI: 7.4249
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn085431genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.51.1e-083293157
                HHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox 31 eeLAkklgLterqVkvWFqNrRakekk 57
                 e+A +lgLte+qV+ WF+ rR k+k+
  Achn085431  3 SEIAGSLGLTEKQVSGWFCHRRLKDKN 29
                79**********************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.948130IPR001356Homeobox domain
CDDcd000864.80E-6131No hitNo description
SuperFamilySSF466891.67E-6237IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-7229IPR009057Homeodomain-like
PfamPF000463.3E-6328IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MKSEIAGSLG LTEKQVSGWF CHRRLKDKNS QHGEAPANGR QDRSSGIVQD HVSGHRQDSC  60
SSTKQGDNRH VNPKEVESRR FTGQDYSAAD LAYEHGHDPD GNDSDTSSES SLPLQYRVHH  120
QNGDPFDMAI SRYLPQGENM LPINSMSIRP RIGPSGYLKV KAPVENAAIT AVKRQLGRHY  180
REDGPALGVE FDPLPPGAFE SSNKDPVNEP CYIGDPDLRP SPDFSRICSQ PNTSMNYQVY  240
NSKMSSQDAD LEGNSFTIMR RFDHWENSLG HQSKPKPILP NHTNPFPGLN SSIEMNEASA  300
GEISVYGSCK MRAKPDLEGR IRVSVSGHHL RPCGYQVTGG QRDEPWLCNT YDVTTRNAHR  360
ECFASKYSNL TRKTRESLDM EDRALSRRMA KVLI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002279963.21e-118PREDICTED: uncharacterized protein LOC100265339
TrEMBLF6HA211e-118F6HA21_VITVI; Putative uncharacterized protein
STRINGVIT_06s0009g03530.t011e-117(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34362242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.12e-50HB-other family protein